Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 AC128676.1-201ENST00000454392 318 ntBASIC17.42■□□□□ 0.38
EBF4Q9BQW3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 AC116562.2-201ENST00000507042 360 ntBASIC17.42■□□□□ 0.38
EBF4Q9BQW3 RPPH1-201ENST00000516869 333 ntBASIC17.42■□□□□ 0.38
EBF4Q9BQW3 AC090192.1-201ENST00000517740 490 ntBASIC17.42■□□□□ 0.38
EBF4Q9BQW3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 AC104390.1-201ENST00000555663 520 ntBASIC17.42■□□□□ 0.38
EBF4Q9BQW3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 AC009949.1-201ENST00000623048 1830 ntBASIC17.42■□□□□ 0.38
EBF4Q9BQW3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF4Q9BQW3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 AC046158.3-201ENST00000624947 2558 ntBASIC17.41■□□□□ 0.38
EBF4Q9BQW3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 MIR935-201ENST00000401179 91 ntBASIC17.41■□□□□ 0.38
EBF4Q9BQW3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 KRT18P6-201ENST00000555540 1265 ntBASIC17.41■□□□□ 0.38
EBF4Q9BQW3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 CD177P1-201ENST00000606252 935 ntBASIC17.41■□□□□ 0.38
EBF4Q9BQW3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
EBF4Q9BQW3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 AC009065.1-201ENST00000564055 1225 ntBASIC17.4■□□□□ 0.38
EBF4Q9BQW3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 FLJ38576-201ENST00000623820 2459 ntBASIC17.4■□□□□ 0.38
EBF4Q9BQW3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF4Q9BQW3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
EBF4Q9BQW3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
EBF4Q9BQW3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms