Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
GFI1Q99684 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.41■□□□□ 0.06
GFI1Q99684 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.41■□□□□ 0.06
GFI1Q99684 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
GFI1Q99684 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
GFI1Q99684 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.41■□□□□ 0.06
GFI1Q99684 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
GFI1Q99684 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.41■□□□□ 0.06
GFI1Q99684 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.41■□□□□ 0.06
GFI1Q99684 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.41■□□□□ 0.06
GFI1Q99684 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.41■□□□□ 0.06
GFI1Q99684 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.41■□□□□ 0.06
GFI1Q99684 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.41■□□□□ 0.06
GFI1Q99684 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.41■□□□□ 0.06
GFI1Q99684 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.41■□□□□ 0.06
GFI1Q99684 AP005242.2-201ENST00000580065 1175 ntBASIC15.41■□□□□ 0.06
GFI1Q99684 MIR4651-201ENST00000582622 73 ntBASIC15.41■□□□□ 0.06
GFI1Q99684 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.41■□□□□ 0.06
GFI1Q99684 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
GFI1Q99684 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.41■□□□□ 0.06
GFI1Q99684 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.41■□□□□ 0.06
GFI1Q99684 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
GFI1Q99684 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
GFI1Q99684 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFI1Q99684 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.41■□□□□ 0.06
GFI1Q99684 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.4■□□□□ 0.06
GFI1Q99684 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GFI1Q99684 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.4■□□□□ 0.06
GFI1Q99684 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.4■□□□□ 0.06
GFI1Q99684 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.4■□□□□ 0.06
GFI1Q99684 KRT8P47-201ENST00000604727 1398 ntBASIC15.4■□□□□ 0.06
GFI1Q99684 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GFI1Q99684 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 KRT18P29-201ENST00000397031 1267 ntBASIC15.4■□□□□ 0.06
GFI1Q99684 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.4■□□□□ 0.06
GFI1Q99684 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 SEC1P-202ENST00000473944 940 ntBASIC15.4■□□□□ 0.06
GFI1Q99684 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.4■□□□□ 0.06
GFI1Q99684 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
GFI1Q99684 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.4■□□□□ 0.06
GFI1Q99684 AC092338.2-201ENST00000568827 1415 ntBASIC15.4■□□□□ 0.06
GFI1Q99684 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
GFI1Q99684 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.4■□□□□ 0.06
GFI1Q99684 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFI1Q99684 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
GFI1Q99684 AC090340.1-201ENST00000620778 4980 ntBASIC15.39■□□□□ 0.06
GFI1Q99684 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
GFI1Q99684 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GFI1Q99684 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFI1Q99684 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFI1Q99684 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFI1Q99684 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.39■□□□□ 0.05
GFI1Q99684 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFI1Q99684 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.39■□□□□ 0.05
GFI1Q99684 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
GFI1Q99684 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFI1Q99684 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.39■□□□□ 0.05
GFI1Q99684 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFI1Q99684 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms