Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.99□□□□□ -0.01
CCL13Q99616 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 AC112698.1-201ENST00000510299 916 ntBASIC14.99□□□□□ -0.01
CCL13Q99616 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCL13Q99616 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.99□□□□□ -0.01
CCL13Q99616 AP002414.4-201ENST00000589764 1148 ntBASIC14.99□□□□□ -0.01
CCL13Q99616 AC092119.3-201ENST00000612618 583 ntBASIC14.99□□□□□ -0.01
CCL13Q99616 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.99□□□□□ -0.01
CCL13Q99616 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.99□□□□□ -0.01
CCL13Q99616 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.99□□□□□ -0.01
CCL13Q99616 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCL13Q99616 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.99□□□□□ -0.01
CCL13Q99616 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL13Q99616 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CCL13Q99616 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.98□□□□□ -0.01
CCL13Q99616 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CCL13Q99616 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 AP002383.4-201ENST00000442518 975 ntBASIC14.98□□□□□ -0.01
CCL13Q99616 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL13Q99616 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.98□□□□□ -0.01
CCL13Q99616 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL13Q99616 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CCL13Q99616 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.98□□□□□ -0.01
CCL13Q99616 AC011840.4-201ENST00000578471 627 ntBASIC14.98□□□□□ -0.01
CCL13Q99616 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL13Q99616 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.98□□□□□ -0.01
CCL13Q99616 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.98□□□□□ -0.01
CCL13Q99616 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL13Q99616 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.98□□□□□ -0.01
CCL13Q99616 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 NOC2LP1-202ENST00000452600 2235 ntBASIC14.98□□□□□ -0.01
CCL13Q99616 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL13Q99616 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.98□□□□□ -0.01
CCL13Q99616 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCL13Q99616 AC100803.2-201ENST00000562459 1963 ntBASIC14.98□□□□□ -0.01
CCL13Q99616 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCL13Q99616 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCL13Q99616 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.98□□□□□ -0.01
CCL13Q99616 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL13Q99616 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCL13Q99616 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.97□□□□□ -0.01
CCL13Q99616 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CCL13Q99616 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL13Q99616 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CCL13Q99616 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.97□□□□□ -0.01
CCL13Q99616 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL13Q99616 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.97□□□□□ -0.01
CCL13Q99616 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.97□□□□□ -0.01
CCL13Q99616 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCL13Q99616 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms