Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH4Q99466 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH4Q99466 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 AC005593.1-201ENST00000624894 515 ntBASIC18.29■□□□□ 0.52
NOTCH4Q99466 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH4Q99466 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH4Q99466 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH4Q99466 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH4Q99466 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.29■□□□□ 0.52
NOTCH4Q99466 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NOTCH4Q99466 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 AC254562.1-201ENST00000417586 456 ntBASIC18.28■□□□□ 0.52
NOTCH4Q99466 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 DDX43P3-201ENST00000441064 443 ntBASIC18.28■□□□□ 0.52
NOTCH4Q99466 RPS15P9-201ENST00000494093 319 ntBASIC18.28■□□□□ 0.52
NOTCH4Q99466 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 AC027612.4-201ENST00000605371 583 ntBASIC18.28■□□□□ 0.52
NOTCH4Q99466 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NOTCH4Q99466 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NOTCH4Q99466 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NOTCH4Q99466 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH4Q99466 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.27■□□□□ 0.52
NOTCH4Q99466 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH4Q99466 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
NOTCH4Q99466 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH4Q99466 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NOTCH4Q99466 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.27■□□□□ 0.52
NOTCH4Q99466 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.27■□□□□ 0.52
NOTCH4Q99466 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.27■□□□□ 0.52
NOTCH4Q99466 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.27■□□□□ 0.52
NOTCH4Q99466 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH4Q99466 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH4Q99466 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.27■□□□□ 0.52
NOTCH4Q99466 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NOTCH4Q99466 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.27■□□□□ 0.52
NOTCH4Q99466 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.27■□□□□ 0.52
NOTCH4Q99466 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NOTCH4Q99466 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NOTCH4Q99466 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.27■□□□□ 0.51
NOTCH4Q99466 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NOTCH4Q99466 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.27■□□□□ 0.51
NOTCH4Q99466 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NOTCH4Q99466 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.27■□□□□ 0.51
NOTCH4Q99466 IGLL3P-201ENST00000412472 434 ntBASIC18.27■□□□□ 0.51
NOTCH4Q99466 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
NOTCH4Q99466 ACTG1P4-201ENST00000425123 1122 ntBASIC18.27■□□□□ 0.51
NOTCH4Q99466 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.27■□□□□ 0.51
NOTCH4Q99466 STK19B-204ENST00000512515 211 ntBASIC18.27■□□□□ 0.51
NOTCH4Q99466 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.27■□□□□ 0.51
NOTCH4Q99466 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.27■□□□□ 0.51
NOTCH4Q99466 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
NOTCH4Q99466 GPR89P-201ENST00000407924 1495 ntBASIC18.27■□□□□ 0.51
NOTCH4Q99466 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.26■□□□□ 0.51
NOTCH4Q99466 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NOTCH4Q99466 AC093503.3-201ENST00000624917 2352 ntBASIC18.26■□□□□ 0.51
NOTCH4Q99466 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms