Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 AKR1C7P-201ENST00000305623 895 ntBASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 AC026396.1-201ENST00000419388 421 ntBASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 ABCD1P5-201ENST00000445663 754 ntBASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 KRT18P55-202ENST00000578578 1546 ntBASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDK5RAP1Q96SZ6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.52■□□□□ 0.55
CDK5RAP1Q96SZ6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
CDK5RAP1Q96SZ6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDK5RAP1Q96SZ6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDK5RAP1Q96SZ6 AC020763.4-201ENST00000623414 4170 ntBASIC18.52■□□□□ 0.55
CDK5RAP1Q96SZ6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.52■□□□□ 0.55
CDK5RAP1Q96SZ6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDK5RAP1Q96SZ6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 BX276092.7-203ENST00000637198 1536 ntBASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 BICD1-207ENST00000551848 1962 ntBASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 SCARNA2-201ENST00000458748 420 ntBASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 AL160237.2-201ENST00000556165 472 ntBASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 AC064862.7-201ENST00000604520 867 ntBASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 AL031008.1-201ENST00000619963 541 ntBASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 AL355877.3-201ENST00000622820 899 ntBASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 AC010460.3-201ENST00000511359 1579 ntBASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.5■□□□□ 0.55
CDK5RAP1Q96SZ6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDK5RAP1Q96SZ6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms