Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC136632.2-201ENST00000512891 861 ntBASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 AC105339.3-201ENST00000560043 636 ntBASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 AC006557.2-201ENST00000592985 1240 ntBASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 AL354751.1-201ENST00000412768 1863 ntBASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 AL020996.1-203ENST00000536896 2307 ntBASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP2Q96SN8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 MED15P5-201ENST00000423150 992 ntBASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 UNC93B6-202ENST00000528242 690 ntBASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 AL022326.1-202ENST00000641533 845 ntBASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 AC006504.4-201ENST00000592118 1568 ntBASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP2Q96SN8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDK5RAP2Q96SN8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDK5RAP2Q96SN8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDK5RAP2Q96SN8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.89■□□□□ 0.94
CDK5RAP2Q96SN8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDK5RAP2Q96SN8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 AC104109.2-201ENST00000602919 1418 ntBASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CDK5RAP2Q96SN8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 PRYP5-201ENST00000451909 266 ntBASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 FAM197Y3-203ENST00000618346 717 ntBASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 KRT18P55-202ENST00000578578 1546 ntBASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms