Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 AC068880.1-201ENST00000507289 2297 ntBASIC14.87□□□□□ -0.03
GAFA1Q96PS6 AC012317.2-201ENST00000623305 2251 ntBASIC14.87□□□□□ -0.03
GAFA1Q96PS6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GAFA1Q96PS6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 AL133373.2-201ENST00000623187 2828 ntBASIC14.86□□□□□ -0.03
GAFA1Q96PS6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 DDX43P3-201ENST00000441064 443 ntBASIC14.86□□□□□ -0.03
GAFA1Q96PS6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
GAFA1Q96PS6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 AC096633.1-201ENST00000422446 749 ntBASIC14.85□□□□□ -0.03
GAFA1Q96PS6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 AC092329.2-201ENST00000598402 547 ntBASIC14.85□□□□□ -0.03
GAFA1Q96PS6 Z69720.1-201ENST00000601483 472 ntBASIC14.85□□□□□ -0.03
GAFA1Q96PS6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.85□□□□□ -0.03
GAFA1Q96PS6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.84□□□□□ -0.03
GAFA1Q96PS6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms