Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 TPSP2-201ENST00000561760 610 ntBASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 AC012317.2-201ENST00000623305 2251 ntBASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
RPGRIP1Q96KN7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 AC079602.3-201ENST00000623931 403 ntBASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPGRIP1Q96KN7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 AC112777.1-201ENST00000540175 1423 ntBASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 TOB2P1-201ENST00000469761 992 ntBASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 AL662844.1-201ENST00000546340 181 ntBASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 AC120114.3-201ENST00000611923 658 ntBASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 MTMR9LP-203ENST00000426597 1545 ntBASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 AC009053.2-201ENST00000563701 2365 ntBASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RPGRIP1Q96KN7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 AL499627.1-201ENST00000569373 2188 ntBASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 MRPL3P1-201ENST00000400109 1033 ntBASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 DRAXINP1-201ENST00000437611 948 ntBASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 AC106795.1-205ENST00000512851 1056 ntBASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 AC139530.3-201ENST00000620344 690 ntBASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RPGRIP1Q96KN7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms