Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CHMP6Q96FZ7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 AC233263.1-201ENST00000578059 224 ntBASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 OR6D1P-203ENST00000641209 4860 ntBASIC18.03■□□□□ 0.48
CHMP6Q96FZ7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 KRASP1-201ENST00000407852 552 ntBASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 CD99P1-205ENST00000527459 561 ntBASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP6Q96FZ7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.02■□□□□ 0.47
CHMP6Q96FZ7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.02■□□□□ 0.47
CHMP6Q96FZ7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP6Q96FZ7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP6Q96FZ7 AC099343.3-201ENST00000605834 2503 ntBASIC18.02■□□□□ 0.47
CHMP6Q96FZ7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.02■□□□□ 0.47
CHMP6Q96FZ7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP6Q96FZ7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CHMP6Q96FZ7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.02■□□□□ 0.47
CHMP6Q96FZ7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 AC006058.3-201ENST00000606217 1069 ntBASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 PCDHA1-201ENST00000378133 2726 ntBASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHMP6Q96FZ7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHMP6Q96FZ7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CHMP6Q96FZ7 KRT8P50-201ENST00000562022 1438 ntBASIC18■□□□□ 0.47
CHMP6Q96FZ7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms