Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 AC015922.1-201ENST00000421102 1152 ntBASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 AL035252.4-201ENST00000624174 288 ntBASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TRIM43Q96BQ3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 KLF4P1-201ENST00000412782 1185 ntBASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 AC005034.1-201ENST00000426657 489 ntBASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 AC023141.5-201ENST00000458585 616 ntBASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 Z92544.3-201ENST00000624747 417 ntBASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 AC007064.4-201ENST00000637740 555 ntBASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 AL121761.2-201ENST00000598007 1648 ntBASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM43Q96BQ3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 REXO1L3P-201ENST00000622202 1288 ntBASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM43Q96BQ3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM43Q96BQ3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.27■□□□□ 0.67
TRIM43Q96BQ3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.27■□□□□ 0.67
TRIM43Q96BQ3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 AP002414.1-201ENST00000391405 1147 ntBASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.26■□□□□ 0.67
TRIM43Q96BQ3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms