Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 REXO1L9P-201ENST00000604264 2108 ntBASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CASKIN1Q8WXD9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2
CASKIN1Q8WXD9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC27.58■■■□□ 2
CASKIN1Q8WXD9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC27.58■■■□□ 2
CASKIN1Q8WXD9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC27.58■■■□□ 2
CASKIN1Q8WXD9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC27.58■■■□□ 2
CASKIN1Q8WXD9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 AP000997.3-201ENST00000623333 2250 ntBASIC27.57■■■□□ 2
CASKIN1Q8WXD9 KRT18P55-202ENST00000578578 1546 ntBASIC27.57■■■□□ 2
CASKIN1Q8WXD9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 DNAJB3-201ENST00000446806 729 ntBASIC27.57■■■□□ 2
CASKIN1Q8WXD9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 AL353135.1-201ENST00000606729 504 ntBASIC27.57■■■□□ 2
CASKIN1Q8WXD9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC27.57■■■□□ 2
CASKIN1Q8WXD9 GPR89P-201ENST00000407924 1495 ntBASIC27.56■■■□□ 2
CASKIN1Q8WXD9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 IGLL3P-201ENST00000412472 434 ntBASIC27.56■■■□□ 2
CASKIN1Q8WXD9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 HCG4B-203ENST00000450128 991 ntBASIC27.56■■■□□ 2
CASKIN1Q8WXD9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC27.56■■■□□ 2
CASKIN1Q8WXD9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 FLJ13224-201ENST00000313737 1514 ntBASIC27.55■■■□□ 2
CASKIN1Q8WXD9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 STK19B-204ENST00000512515 211 ntBASIC27.55■■■□□ 2
CASKIN1Q8WXD9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
CASKIN1Q8WXD9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 AL691403.2-201ENST00000618460 490 ntBASIC27.54■■■□□ 2
CASKIN1Q8WXD9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC27.54■■■□□ 2
CASKIN1Q8WXD9 AL020996.1-203ENST00000536896 2307 ntBASIC27.54■■■□□ 2
CASKIN1Q8WXD9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC27.53■■■□□ 2
CASKIN1Q8WXD9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC27.53■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms