Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC44A1Q8WWI5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 TSPY7P-201ENST00000431358 1114 ntBASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 PVRIG2P-201ENST00000435460 978 ntBASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 DDX43P3-201ENST00000441064 443 ntBASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 EGLN1P1-201ENST00000531623 762 ntBASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SLC44A1Q8WWI5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 AC113404.2-201ENST00000507884 177 ntBASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 AC092865.7-201ENST00000641832 219 ntBASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC44A1Q8WWI5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SLC44A1Q8WWI5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms