Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 LINC02199-201ENST00000506655 2702 ntBASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 AC133041.1-202ENST00000642053 222 ntBASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 AC060834.1-201ENST00000443027 2032 ntBASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNIH3Q8TBE1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 RPS2P4-201ENST00000476944 856 ntBASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNIH3Q8TBE1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 KRASP1-201ENST00000407852 552 ntBASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 AC069152.1-201ENST00000438030 544 ntBASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 AC008403.3-201ENST00000598924 454 ntBASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 AL023875.1-201ENST00000640777 796 ntBASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNIH3Q8TBE1 AC036111.1-201ENST00000533973 1582 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms