Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AC022898.2-201ENST00000616822 1312 ntBASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AC016734.2-201ENST00000624325 1377 ntBASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMARCC2Q8TAQ2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 GPR32P1-201ENST00000601788 811 ntBASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.93■□□□□ 0.94
SMARCC2Q8TAQ2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 PP12613-201ENST00000424958 2230 ntBASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 IGHGP-201ENST00000390555 1178 ntBASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCC2Q8TAQ2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 KRT18P65-201ENST00000439811 1286 ntBASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 HCG4P8-203ENST00000443049 980 ntBASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 AL390719.2-201ENST00000606993 987 ntBASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCC2Q8TAQ2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 AL355312.1-201ENST00000407115 2176 ntBASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 KRT8P47-201ENST00000604727 1398 ntBASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCC2Q8TAQ2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms