Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 UNC93B2-201ENST00000285383 730 ntBASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 AL353719.1-201ENST00000566847 864 ntBASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 Z99916.2-201ENST00000604037 246 ntBASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DNAAF1Q8NEP3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 KRT18P55-202ENST00000578578 1546 ntBASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DNAAF1Q8NEP3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 AL355312.1-201ENST00000407115 2176 ntBASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 MIR149-201ENST00000384879 89 ntBASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 WWOX-216ENST00000569818 525 ntBASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 MIR4674-201ENST00000582457 87 ntBASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 MIR4785-201ENST00000585005 73 ntBASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 AL023806.1-201ENST00000603994 1649 ntBASIC15.76■□□□□ 0.11
DNAAF1Q8NEP3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 AP001094.4-201ENST00000579008 2176 ntBASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 CCR12P-201ENST00000446203 998 ntBASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 AC009065.1-201ENST00000564055 1225 ntBASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 LINC01126-201ENST00000623515 1646 ntBASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.75■□□□□ 0.11
DNAAF1Q8NEP3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms