Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 AL138831.2-201ENST00000606564 490 ntBASIC18.33■□□□□ 0.52
RTL3Q8N8U3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RTL3Q8N8U3 AC125634.1-201ENST00000438758 1403 ntBASIC18.32■□□□□ 0.52
RTL3Q8N8U3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 AC097374.2-201ENST00000618617 1306 ntBASIC18.32■□□□□ 0.52
RTL3Q8N8U3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 DDX43P3-201ENST00000441064 443 ntBASIC18.32■□□□□ 0.52
RTL3Q8N8U3 HCG4P8-203ENST00000443049 980 ntBASIC18.32■□□□□ 0.52
RTL3Q8N8U3 KRT17P6-201ENST00000453795 1220 ntBASIC18.32■□□□□ 0.52
RTL3Q8N8U3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RTL3Q8N8U3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 AC006116.8-202ENST00000587620 1550 ntBASIC18.31■□□□□ 0.52
RTL3Q8N8U3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 IGHV3-47-201ENST00000425060 335 ntBASIC18.31■□□□□ 0.52
RTL3Q8N8U3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 AP000867.3-201ENST00000524675 377 ntBASIC18.31■□□□□ 0.52
RTL3Q8N8U3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.31■□□□□ 0.52
RTL3Q8N8U3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.3■□□□□ 0.52
RTL3Q8N8U3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.3■□□□□ 0.52
RTL3Q8N8U3 AC012615.1-201ENST00000565797 1299 ntBASIC18.3■□□□□ 0.52
RTL3Q8N8U3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms