Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD3Q8N328 INTS4P1-201ENST00000438455 1935 ntBASIC18.15■□□□□ 0.5
PGBD3Q8N328 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD3Q8N328 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD3Q8N328 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PGBD3Q8N328 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD3Q8N328 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.15■□□□□ 0.5
PGBD3Q8N328 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
PGBD3Q8N328 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD3Q8N328 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PGBD3Q8N328 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PGBD3Q8N328 AL031598.1-201ENST00000561511 1773 ntBASIC18.14■□□□□ 0.5
PGBD3Q8N328 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PGBD3Q8N328 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PGBD3Q8N328 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.14■□□□□ 0.5
PGBD3Q8N328 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PGBD3Q8N328 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 AC116407.3-201ENST00000623905 1129 ntBASIC18.14■□□□□ 0.49
PGBD3Q8N328 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
PGBD3Q8N328 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PGBD3Q8N328 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 MIR1233-2-201ENST00000408138 82 ntBASIC18.13■□□□□ 0.49
PGBD3Q8N328 MIR1233-1-201ENST00000408722 82 ntBASIC18.13■□□□□ 0.49
PGBD3Q8N328 HNRNPDP1-201ENST00000439535 754 ntBASIC18.13■□□□□ 0.49
PGBD3Q8N328 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 AL138831.2-201ENST00000606564 490 ntBASIC18.13■□□□□ 0.49
PGBD3Q8N328 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PGBD3Q8N328 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PGBD3Q8N328 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD3Q8N328 AC125634.1-201ENST00000438758 1403 ntBASIC18.12■□□□□ 0.49
PGBD3Q8N328 AP005117.1-201ENST00000584346 1413 ntBASIC18.12■□□□□ 0.49
PGBD3Q8N328 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PGBD3Q8N328 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms