Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 UNC93B6-202ENST00000528242 690 ntBASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 AC105339.3-201ENST00000560043 636 ntBASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 AD001527.2-201ENST00000622994 785 ntBASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RAI1Q7Z5J4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 AC092183.1-201ENST00000469884 875 ntBASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 AC122714.2-201ENST00000502787 707 ntBASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 AC073592.4-201ENST00000623827 446 ntBASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAI1Q7Z5J4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 AC148477.5-201ENST00000625164 1645 ntBASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 PMS2P2-201ENST00000425039 1128 ntBASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 GPX1P2-201ENST00000429271 606 ntBASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 KRT18P3-201ENST00000451602 1288 ntBASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAI1Q7Z5J4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms