Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC62Q6P9F0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 AP000974.1-201ENST00000623909 2387 ntBASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 OR7E14P-202ENST00000530490 1290 ntBASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 MTDHP4-201ENST00000600287 670 ntBASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC62Q6P9F0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 AC079776.2-201ENST00000641154 1609 ntBASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 POLD2P1-201ENST00000511220 997 ntBASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 AC073592.4-201ENST00000623827 446 ntBASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 AC107918.4-202ENST00000641623 219 ntBASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC62Q6P9F0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 HLA-J-201ENST00000462773 1622 ntBASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 AC008735.5-201ENST00000623544 497 ntBASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC62Q6P9F0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC62Q6P9F0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.02■□□□□ 0.79
CCDC62Q6P9F0 TNXA-203ENST00000507684 2038 ntBASIC20.02■□□□□ 0.79
CCDC62Q6P9F0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC62Q6P9F0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC62Q6P9F0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC62Q6P9F0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC62Q6P9F0 ZNF259P1-201ENST00000407656 1365 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms