Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 AC005104.2-201ENST00000427818 678 ntBASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 AC007967.3-201ENST00000434308 558 ntBASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 Z69720.1-201ENST00000601483 472 ntBASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 LINC01451-201ENST00000623792 534 ntBASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 LINC00896-202ENST00000609602 2128 ntBASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 AC133963.1-201ENST00000504166 1679 ntBASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TTC41PQ6P2S7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 COX5BP2-201ENST00000392354 334 ntBASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC41PQ6P2S7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 IGHV3-47-201ENST00000425060 335 ntBASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC41PQ6P2S7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 UPK3BP1-201ENST00000428678 509 ntBASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 LINC00265-3P-201ENST00000447588 903 ntBASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 KRT17P6-201ENST00000453795 1220 ntBASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 HLA-J-201ENST00000462773 1622 ntBASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC41PQ6P2S7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms