Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 STOM-202ENST00000347359 870 ntTSL 2 BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 AC068137.2-201ENST00000605408 478 ntBASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 KRT18P28-201ENST00000453838 1332 ntBASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.83■■□□□ 1.89
CDC42BPAQ5VT25 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC26.83■■□□□ 1.88
CDC42BPAQ5VT25 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CDC42BPAQ5VT25 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 SPCS2P1-201ENST00000561636 679 ntBASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 AC091812.2-201ENST00000619081 385 ntBASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 AC004877.2-201ENST00000623941 599 ntBASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CDC42BPAQ5VT25 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 CYB561-216ENST00000582297 897 ntTSL 3 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 AL590787.1-201ENST00000568856 1315 ntBASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC26.8■■□□□ 1.88
CDC42BPAQ5VT25 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CDC42BPAQ5VT25 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms