Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC122714.2-201ENST00000502787 707 ntBASIC17.23■□□□□ 0.35
RIF1Q5UIP0 FAM8A2P-201ENST00000528813 1142 ntBASIC17.23■□□□□ 0.35
RIF1Q5UIP0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 AD001527.2-201ENST00000622994 785 ntBASIC17.23■□□□□ 0.35
RIF1Q5UIP0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 FO538757.1-201ENST00000623083 1397 ntBASIC17.23■□□□□ 0.35
RIF1Q5UIP0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 MRPS18AP1-201ENST00000414458 589 ntBASIC17.22■□□□□ 0.35
RIF1Q5UIP0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 FP475955.4-201ENST00000623131 1990 ntBASIC17.22■□□□□ 0.35
RIF1Q5UIP0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 AL020989.1-201ENST00000422979 469 ntBASIC17.22■□□□□ 0.35
RIF1Q5UIP0 AC092658.1-201ENST00000505836 891 ntBASIC17.22■□□□□ 0.35
RIF1Q5UIP0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 AC106886.1-201ENST00000568660 600 ntBASIC17.22■□□□□ 0.35
RIF1Q5UIP0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 AC009118.2-201ENST00000613275 655 ntBASIC17.22■□□□□ 0.35
RIF1Q5UIP0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RIF1Q5UIP0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.21■□□□□ 0.35
RIF1Q5UIP0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RIF1Q5UIP0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RIF1Q5UIP0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RIF1Q5UIP0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
RIF1Q5UIP0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RIF1Q5UIP0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.21■□□□□ 0.34
RIF1Q5UIP0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.21■□□□□ 0.34
RIF1Q5UIP0 SPTSSB-204ENST00000617024 1292 ntBASIC17.21■□□□□ 0.34
RIF1Q5UIP0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RIF1Q5UIP0 LINC00565-201ENST00000562710 2331 ntBASIC17.2■□□□□ 0.34
RIF1Q5UIP0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 TCF3P1-201ENST00000423021 1937 ntBASIC17.2■□□□□ 0.34
RIF1Q5UIP0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.2■□□□□ 0.34
RIF1Q5UIP0 FAM185BP-201ENST00000443595 716 ntBASIC17.2■□□□□ 0.34
RIF1Q5UIP0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms