Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 AKR1C7P-201ENST00000305623 895 ntBASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 AC010460.3-201ENST00000511359 1579 ntBASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 AC135050.7-201ENST00000624508 2218 ntBASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 AC132008.2-207ENST00000454517 770 ntBASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 AL354751.1-201ENST00000412768 1863 ntBASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39AQ5SRH9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 FAM220CP-201ENST00000395253 831 ntBASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 REXO1L6P-202ENST00000619970 1078 ntBASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39AQ5SRH9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms