Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.64■□□□□ 0.25
CD47Q08722 TSPY7P-201ENST00000431358 1114 ntBASIC16.64■□□□□ 0.25
CD47Q08722 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.64■□□□□ 0.25
CD47Q08722 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.64■□□□□ 0.25
CD47Q08722 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.64■□□□□ 0.25
CD47Q08722 MIR4785-201ENST00000585005 73 ntBASIC16.64■□□□□ 0.25
CD47Q08722 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CD47Q08722 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CD47Q08722 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CD47Q08722 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.64■□□□□ 0.25
CD47Q08722 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.64■□□□□ 0.25
CD47Q08722 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
CD47Q08722 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD47Q08722 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CD47Q08722 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.63■□□□□ 0.25
CD47Q08722 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 PCDHB19P-201ENST00000570871 2371 ntBASIC16.63■□□□□ 0.25
CD47Q08722 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CD47Q08722 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD47Q08722 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.63■□□□□ 0.25
CD47Q08722 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.63■□□□□ 0.25
CD47Q08722 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CD47Q08722 AP000593.1-201ENST00000393668 712 ntBASIC16.63■□□□□ 0.25
CD47Q08722 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.63■□□□□ 0.25
CD47Q08722 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.63■□□□□ 0.25
CD47Q08722 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.63■□□□□ 0.25
CD47Q08722 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.63■□□□□ 0.25
CD47Q08722 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD47Q08722 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD47Q08722 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.63■□□□□ 0.25
CD47Q08722 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.63■□□□□ 0.25
CD47Q08722 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CD47Q08722 AC099343.3-201ENST00000605834 2503 ntBASIC16.63■□□□□ 0.25
CD47Q08722 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.63■□□□□ 0.25
CD47Q08722 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.63■□□□□ 0.25
CD47Q08722 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD47Q08722 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.63■□□□□ 0.25
CD47Q08722 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.62■□□□□ 0.25
CD47Q08722 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CD47Q08722 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CD47Q08722 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.62■□□□□ 0.25
CD47Q08722 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.62■□□□□ 0.25
CD47Q08722 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CD47Q08722 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.62■□□□□ 0.25
CD47Q08722 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.62■□□□□ 0.25
CD47Q08722 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.62■□□□□ 0.25
CD47Q08722 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 UNC93B2-201ENST00000285383 730 ntBASIC16.62■□□□□ 0.25
CD47Q08722 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.62■□□□□ 0.25
CD47Q08722 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CD47Q08722 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CD47Q08722 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.62■□□□□ 0.25
CD47Q08722 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.62■□□□□ 0.25
CD47Q08722 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.62■□□□□ 0.25
CD47Q08722 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD47Q08722 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CD47Q08722 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.62■□□□□ 0.25
CD47Q08722 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CD47Q08722 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD47Q08722 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.61■□□□□ 0.25
CD47Q08722 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.61■□□□□ 0.25
CD47Q08722 PCDH8P1-201ENST00000428983 2773 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms