Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NKX6-1P78426 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NKX6-1P78426 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.77■□□□□ 0.11
NKX6-1P78426 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
NKX6-1P78426 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX6-1P78426 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX6-1P78426 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NKX6-1P78426 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX6-1P78426 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX6-1P78426 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX6-1P78426 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX6-1P78426 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX6-1P78426 KRT16P4-201ENST00000453883 522 ntBASIC15.76■□□□□ 0.11
NKX6-1P78426 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.76■□□□□ 0.11
NKX6-1P78426 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NKX6-1P78426 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX6-1P78426 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 Z69720.1-201ENST00000601483 472 ntBASIC15.76■□□□□ 0.11
NKX6-1P78426 AC099336.1-202ENST00000602961 463 ntBASIC15.76■□□□□ 0.11
NKX6-1P78426 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX6-1P78426 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX6-1P78426 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NKX6-1P78426 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
NKX6-1P78426 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 AL133373.2-201ENST00000623187 2828 ntBASIC15.76■□□□□ 0.11
NKX6-1P78426 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX6-1P78426 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-1P78426 NFIC-211ENST00000641145 8399 ntBASIC15.75■□□□□ 0.11
NKX6-1P78426 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.75■□□□□ 0.11
NKX6-1P78426 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX6-1P78426 HLA-A-201ENST00000376802 1334 ntBASIC15.75■□□□□ 0.11
NKX6-1P78426 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX6-1P78426 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.75■□□□□ 0.11
NKX6-1P78426 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 AP003733.1-201ENST00000491725 852 ntBASIC15.75■□□□□ 0.11
NKX6-1P78426 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX6-1P78426 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.75■□□□□ 0.11
NKX6-1P78426 AC139530.3-201ENST00000620344 690 ntBASIC15.75■□□□□ 0.11
NKX6-1P78426 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NKX6-1P78426 AC106820.2-201ENST00000563775 3264 ntBASIC15.75■□□□□ 0.11
NKX6-1P78426 LINC00167-201ENST00000530583 1419 ntBASIC15.75■□□□□ 0.11
NKX6-1P78426 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NKX6-1P78426 PKD1P5-201ENST00000532415 10291 ntBASIC15.75■□□□□ 0.11
NKX6-1P78426 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX6-1P78426 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-1P78426 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NKX6-1P78426 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX6-1P78426 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 AP000997.3-201ENST00000623333 2250 ntBASIC15.74■□□□□ 0.11
NKX6-1P78426 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NKX6-1P78426 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.74■□□□□ 0.11
NKX6-1P78426 KRT18P13-201ENST00000400056 1290 ntBASIC15.74■□□□□ 0.11
NKX6-1P78426 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX6-1P78426 PMS2P1-201ENST00000431037 1228 ntBASIC15.74■□□□□ 0.11
NKX6-1P78426 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.74■□□□□ 0.11
NKX6-1P78426 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.74■□□□□ 0.11
NKX6-1P78426 AC064862.7-201ENST00000604520 867 ntBASIC15.74■□□□□ 0.11
NKX6-1P78426 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms