Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCR4P61073 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CXCR4P61073 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCR4P61073 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 AL023284.2-201ENST00000405850 579 ntBASIC16.31■□□□□ 0.2
CXCR4P61073 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.31■□□□□ 0.2
CXCR4P61073 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 MCCD1P1-208ENST00000445732 328 ntBASIC16.31■□□□□ 0.2
CXCR4P61073 AC128676.1-201ENST00000454392 318 ntBASIC16.31■□□□□ 0.2
CXCR4P61073 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCR4P61073 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCR4P61073 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCR4P61073 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCR4P61073 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.31■□□□□ 0.2
CXCR4P61073 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCR4P61073 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCR4P61073 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCR4P61073 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CXCR4P61073 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CXCR4P61073 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCR4P61073 FSCN1P1-201ENST00000568912 1481 ntBASIC16.3■□□□□ 0.2
CXCR4P61073 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CXCR4P61073 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CXCR4P61073 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CXCR4P61073 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CXCR4P61073 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.3■□□□□ 0.2
CXCR4P61073 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CXCR4P61073 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCR4P61073 RARRES2P10-201ENST00000564312 460 ntBASIC16.3■□□□□ 0.2
CXCR4P61073 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCR4P61073 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CXCR4P61073 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CXCR4P61073 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCR4P61073 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 GPAT2P1-201ENST00000444924 1672 ntBASIC16.3■□□□□ 0.2
CXCR4P61073 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCR4P61073 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCR4P61073 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CXCR4P61073 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.29■□□□□ 0.2
CXCR4P61073 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 AL391005.1-201ENST00000623953 2435 ntBASIC16.29■□□□□ 0.2
CXCR4P61073 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.29■□□□□ 0.2
CXCR4P61073 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.29■□□□□ 0.2
CXCR4P61073 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.29■□□□□ 0.2
CXCR4P61073 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CXCR4P61073 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.29■□□□□ 0.2
CXCR4P61073 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.29■□□□□ 0.2
CXCR4P61073 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.29■□□□□ 0.2
CXCR4P61073 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 AP000692.2-201ENST00000608391 879 ntBASIC16.29■□□□□ 0.2
CXCR4P61073 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.29■□□□□ 0.2
CXCR4P61073 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CXCR4P61073 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms