Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC067852.2-201ENST00000590513 2313 ntBASIC20.44■□□□□ 0.86
CHMP4BP1P59074 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 AL163051.1-201ENST00000569214 1512 ntBASIC20.44■□□□□ 0.86
CHMP4BP1P59074 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 MRPL3P1-201ENST00000400109 1033 ntBASIC20.44■□□□□ 0.86
CHMP4BP1P59074 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 RN7SL606P-201ENST00000472779 293 ntBASIC20.44■□□□□ 0.86
CHMP4BP1P59074 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 AL121912.1-201ENST00000603683 238 ntBASIC20.44■□□□□ 0.86
CHMP4BP1P59074 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP4BP1P59074 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP4BP1P59074 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP4BP1P59074 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 PKD1P1-201ENST00000458669 6805 ntBASIC20.41■□□□□ 0.86
CHMP4BP1P59074 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 SLC25A6P4-201ENST00000586535 553 ntBASIC20.41■□□□□ 0.86
CHMP4BP1P59074 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP4BP1P59074 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms