Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN12P56749 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.57■□□□□ 0.08
CLDN12P56749 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.57■□□□□ 0.08
CLDN12P56749 AC073648.6-201ENST00000641589 218 ntBASIC15.57■□□□□ 0.08
CLDN12P56749 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CLDN12P56749 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 FSCN1P1-201ENST00000568912 1481 ntBASIC15.57■□□□□ 0.08
CLDN12P56749 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CLDN12P56749 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLDN12P56749 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN12P56749 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN12P56749 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
CLDN12P56749 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 KRT18P23-201ENST00000435622 1283 ntBASIC15.56■□□□□ 0.08
CLDN12P56749 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 AC096733.2-201ENST00000609937 1394 ntBASIC15.56■□□□□ 0.08
CLDN12P56749 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLDN12P56749 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.56■□□□□ 0.08
CLDN12P56749 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.56■□□□□ 0.08
CLDN12P56749 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
CLDN12P56749 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLDN12P56749 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 AC106886.4-201ENST00000623557 2502 ntBASIC15.55■□□□□ 0.08
CLDN12P56749 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN12P56749 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN12P56749 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN12P56749 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CLDN12P56749 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN12P56749 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CLDN12P56749 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN12P56749 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.55■□□□□ 0.08
CLDN12P56749 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLDN12P56749 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN12P56749 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN12P56749 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLDN12P56749 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms