Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP1S2P56377 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.42■□□□□ 0.38
AP1S2P56377 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S2P56377 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
AP1S2P56377 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.42■□□□□ 0.38
AP1S2P56377 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S2P56377 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S2P56377 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S2P56377 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.42■□□□□ 0.38
AP1S2P56377 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.42■□□□□ 0.38
AP1S2P56377 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S2P56377 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
AP1S2P56377 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
AP1S2P56377 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S2P56377 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
AP1S2P56377 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP1S2P56377 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.42■□□□□ 0.38
AP1S2P56377 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP1S2P56377 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.41■□□□□ 0.38
AP1S2P56377 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 AL031133.1-201ENST00000406807 723 ntBASIC17.41■□□□□ 0.38
AP1S2P56377 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 MTCL1P1-201ENST00000446207 792 ntBASIC17.41■□□□□ 0.38
AP1S2P56377 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.41■□□□□ 0.38
AP1S2P56377 AC068472.1-201ENST00000474589 881 ntBASIC17.41■□□□□ 0.38
AP1S2P56377 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.41■□□□□ 0.38
AP1S2P56377 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.41■□□□□ 0.38
AP1S2P56377 AL590326.2-201ENST00000625139 305 ntBASIC17.41■□□□□ 0.38
AP1S2P56377 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S2P56377 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.41■□□□□ 0.38
AP1S2P56377 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
AP1S2P56377 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP1S2P56377 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP1S2P56377 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP1S2P56377 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
AP1S2P56377 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S2P56377 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.4■□□□□ 0.38
AP1S2P56377 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 GUSBP12-201ENST00000513727 720 ntBASIC17.4■□□□□ 0.38
AP1S2P56377 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.4■□□□□ 0.38
AP1S2P56377 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S2P56377 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP1S2P56377 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.4■□□□□ 0.38
AP1S2P56377 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S2P56377 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S2P56377 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.4■□□□□ 0.38
AP1S2P56377 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.39■□□□□ 0.38
AP1S2P56377 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
AP1S2P56377 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP1S2P56377 PCDHB18P-201ENST00000524813 2368 ntBASIC17.39■□□□□ 0.38
AP1S2P56377 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S2P56377 OR6D1P-202ENST00000641007 5290 ntBASIC17.39■□□□□ 0.37
AP1S2P56377 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S2P56377 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
AP1S2P56377 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S2P56377 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S2P56377 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S2P56377 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
AP1S2P56377 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.39■□□□□ 0.37
AP1S2P56377 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms