Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 HLA-A-201ENST00000376802 1334 ntBASIC18.28■□□□□ 0.52
ATXN3P54252 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ATXN3P54252 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.28■□□□□ 0.52
ATXN3P54252 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.28■□□□□ 0.52
ATXN3P54252 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
ATXN3P54252 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 SAPCD2P3-201ENST00000455031 850 ntBASIC18.28■□□□□ 0.52
ATXN3P54252 AC104390.1-201ENST00000555663 520 ntBASIC18.28■□□□□ 0.52
ATXN3P54252 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.28■□□□□ 0.52
ATXN3P54252 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 AC124864.1-201ENST00000623408 392 ntBASIC18.28■□□□□ 0.52
ATXN3P54252 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
ATXN3P54252 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATXN3P54252 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATXN3P54252 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.27■□□□□ 0.52
ATXN3P54252 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ATXN3P54252 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.27■□□□□ 0.52
ATXN3P54252 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 AP001005.1-201ENST00000571755 1248 ntBASIC18.27■□□□□ 0.52
ATXN3P54252 GPR32P1-201ENST00000601788 811 ntBASIC18.27■□□□□ 0.52
ATXN3P54252 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.27■□□□□ 0.52
ATXN3P54252 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ATXN3P54252 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 IRX1P1-201ENST00000438849 1838 ntBASIC18.27■□□□□ 0.52
ATXN3P54252 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.27■□□□□ 0.52
ATXN3P54252 AL109659.2-201ENST00000606809 1674 ntBASIC18.27■□□□□ 0.52
ATXN3P54252 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATXN3P54252 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATXN3P54252 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ATXN3P54252 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATXN3P54252 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ATXN3P54252 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.27■□□□□ 0.51
ATXN3P54252 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATXN3P54252 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ATXN3P54252 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.51
ATXN3P54252 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATXN3P54252 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
ATXN3P54252 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
ATXN3P54252 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ATXN3P54252 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ATXN3P54252 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
ATXN3P54252 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ATXN3P54252 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.26■□□□□ 0.51
ATXN3P54252 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ATXN3P54252 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 NUS1P2-201ENST00000417358 873 ntBASIC18.26■□□□□ 0.51
ATXN3P54252 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ATXN3P54252 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.26■□□□□ 0.51
ATXN3P54252 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ATXN3P54252 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
ATXN3P54252 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 AC139530.3-201ENST00000620344 690 ntBASIC18.26■□□□□ 0.51
ATXN3P54252 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 RCC2P3-201ENST00000418112 1537 ntBASIC18.26■□□□□ 0.51
ATXN3P54252 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms