Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NUBP1P53384 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.75■□□□□ 0.43
NUBP1P53384 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.75■□□□□ 0.43
NUBP1P53384 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.75■□□□□ 0.43
NUBP1P53384 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC17.75■□□□□ 0.43
NUBP1P53384 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.75■□□□□ 0.43
NUBP1P53384 AL121578.1-201ENST00000428051 892 ntBASIC17.75■□□□□ 0.43
NUBP1P53384 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.75■□□□□ 0.43
NUBP1P53384 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.75■□□□□ 0.43
NUBP1P53384 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC17.75■□□□□ 0.43
NUBP1P53384 AC112191.1-201ENST00000523689 701 ntBASIC17.75■□□□□ 0.43
NUBP1P53384 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.75■□□□□ 0.43
NUBP1P53384 AC005520.3-201ENST00000602874 370 ntBASIC17.75■□□□□ 0.43
NUBP1P53384 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NUBP1P53384 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NUBP1P53384 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NUBP1P53384 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NUBP1P53384 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NUBP1P53384 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.74■□□□□ 0.43
NUBP1P53384 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NUBP1P53384 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NUBP1P53384 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.74■□□□□ 0.43
NUBP1P53384 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 MTMR9LP-203ENST00000426597 1545 ntBASIC17.74■□□□□ 0.43
NUBP1P53384 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.74■□□□□ 0.43
NUBP1P53384 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 AL627223.1-201ENST00000416693 442 ntBASIC17.74■□□□□ 0.43
NUBP1P53384 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.74■□□□□ 0.43
NUBP1P53384 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC17.74■□□□□ 0.43
NUBP1P53384 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NUBP1P53384 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.74■□□□□ 0.43
NUBP1P53384 AC017099.1-201ENST00000448261 1028 ntBASIC17.74■□□□□ 0.43
NUBP1P53384 SEPHS1P7-201ENST00000452995 1177 ntBASIC17.74■□□□□ 0.43
NUBP1P53384 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 TRIM36-IT1-201ENST00000503723 881 ntBASIC17.74■□□□□ 0.43
NUBP1P53384 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.74■□□□□ 0.43
NUBP1P53384 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.74■□□□□ 0.43
NUBP1P53384 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.74■□□□□ 0.43
NUBP1P53384 LINC02560-201ENST00000596379 459 ntBASIC17.74■□□□□ 0.43
NUBP1P53384 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.74■□□□□ 0.43
NUBP1P53384 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC17.74■□□□□ 0.43
NUBP1P53384 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.74■□□□□ 0.43
NUBP1P53384 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NUBP1P53384 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.74■□□□□ 0.43
NUBP1P53384 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NUBP1P53384 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.74■□□□□ 0.43
NUBP1P53384 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NUBP1P53384 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NUBP1P53384 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
NUBP1P53384 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NUBP1P53384 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.73■□□□□ 0.43
NUBP1P53384 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.73■□□□□ 0.43
NUBP1P53384 MTATP6P17-201ENST00000431030 672 ntBASIC17.73■□□□□ 0.43
NUBP1P53384 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NUBP1P53384 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC17.73■□□□□ 0.43
NUBP1P53384 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.73■□□□□ 0.43
NUBP1P53384 FAM86C2P-203ENST00000528684 1004 ntBASIC17.73■□□□□ 0.43
NUBP1P53384 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.73■□□□□ 0.43
NUBP1P53384 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.73■□□□□ 0.43
NUBP1P53384 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC17.73■□□□□ 0.43
NUBP1P53384 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.73■□□□□ 0.43
NUBP1P53384 LINC01922-201ENST00000562582 719 ntBASIC17.73■□□□□ 0.43
NUBP1P53384 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NUBP1P53384 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.73■□□□□ 0.43
NUBP1P53384 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.73■□□□□ 0.43
NUBP1P53384 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms