Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC120498.9-201ENST00000339021 3867 ntBASIC15.53■□□□□ 0.08
HCFC1P51610 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.53■□□□□ 0.08
HCFC1P51610 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HCFC1P51610 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
HCFC1P51610 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HCFC1P51610 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
HCFC1P51610 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.52■□□□□ 0.08
HCFC1P51610 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCFC1P51610 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HCFC1P51610 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HCFC1P51610 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HCFC1P51610 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HCFC1P51610 AC254562.1-201ENST00000417586 456 ntBASIC15.52■□□□□ 0.08
HCFC1P51610 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.52■□□□□ 0.08
HCFC1P51610 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.52■□□□□ 0.08
HCFC1P51610 BX005266.1-201ENST00000473402 457 ntBASIC15.52■□□□□ 0.08
HCFC1P51610 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HCFC1P51610 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.52■□□□□ 0.08
HCFC1P51610 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.52■□□□□ 0.08
HCFC1P51610 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.52■□□□□ 0.08
HCFC1P51610 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.52■□□□□ 0.08
HCFC1P51610 AD001527.2-201ENST00000622994 785 ntBASIC15.52■□□□□ 0.08
HCFC1P51610 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HCFC1P51610 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HCFC1P51610 AC132938.6-201ENST00000623828 1655 ntBASIC15.52■□□□□ 0.07
HCFC1P51610 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.52■□□□□ 0.07
HCFC1P51610 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.52■□□□□ 0.07
HCFC1P51610 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HCFC1P51610 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HCFC1P51610 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HCFC1P51610 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HCFC1P51610 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HCFC1P51610 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HCFC1P51610 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HCFC1P51610 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.51■□□□□ 0.07
HCFC1P51610 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.51■□□□□ 0.07
HCFC1P51610 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.51■□□□□ 0.07
HCFC1P51610 AP006288.1-201ENST00000446065 395 ntBASIC15.51■□□□□ 0.07
HCFC1P51610 AC108073.2-201ENST00000464002 357 ntBASIC15.51■□□□□ 0.07
HCFC1P51610 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.51■□□□□ 0.07
HCFC1P51610 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
HCFC1P51610 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.51■□□□□ 0.07
HCFC1P51610 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HCFC1P51610 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.51■□□□□ 0.07
HCFC1P51610 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
HCFC1P51610 AC122714.2-201ENST00000502787 707 ntBASIC15.51■□□□□ 0.07
HCFC1P51610 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.51■□□□□ 0.07
HCFC1P51610 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.51■□□□□ 0.07
HCFC1P51610 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.51■□□□□ 0.07
HCFC1P51610 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC1P51610 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.51■□□□□ 0.07
HCFC1P51610 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC1P51610 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.5■□□□□ 0.07
HCFC1P51610 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HCFC1P51610 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.5■□□□□ 0.07
HCFC1P51610 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
HCFC1P51610 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC1P51610 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 GMCL1P1-201ENST00000463439 1581 ntBASIC15.5■□□□□ 0.07
HCFC1P51610 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HCFC1P51610 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC1P51610 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
HCFC1P51610 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC1P51610 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 WIZP1-201ENST00000531444 2299 ntBASIC15.5■□□□□ 0.07
HCFC1P51610 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC1P51610 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms