Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.04■□□□□ 0.32
PRIM2P49643 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.04■□□□□ 0.32
PRIM2P49643 SLC25A3P1-201ENST00000443844 931 ntBASIC17.04■□□□□ 0.32
PRIM2P49643 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.04■□□□□ 0.32
PRIM2P49643 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.04■□□□□ 0.32
PRIM2P49643 MIR3917-201ENST00000580971 93 ntBASIC17.04■□□□□ 0.32
PRIM2P49643 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 AC141257.4-201ENST00000634557 245 ntBASIC17.04■□□□□ 0.32
PRIM2P49643 AC136944.6-201ENST00000634818 245 ntBASIC17.04■□□□□ 0.32
PRIM2P49643 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.04■□□□□ 0.32
PRIM2P49643 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.04■□□□□ 0.32
PRIM2P49643 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.04■□□□□ 0.32
PRIM2P49643 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRIM2P49643 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PRIM2P49643 AC141586.5-201ENST00000624546 2050 ntBASIC17.03■□□□□ 0.32
PRIM2P49643 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.03■□□□□ 0.32
PRIM2P49643 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PRIM2P49643 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.03■□□□□ 0.32
PRIM2P49643 ATP5G1P1-201ENST00000448724 379 ntBASIC17.03■□□□□ 0.32
PRIM2P49643 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.03■□□□□ 0.32
PRIM2P49643 AC008687.5-201ENST00000593746 558 ntBASIC17.03■□□□□ 0.32
PRIM2P49643 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.03■□□□□ 0.32
PRIM2P49643 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.03■□□□□ 0.32
PRIM2P49643 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PRIM2P49643 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PRIM2P49643 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PRIM2P49643 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PRIM2P49643 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 NFIC-211ENST00000641145 8399 ntBASIC17.03■□□□□ 0.32
PRIM2P49643 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRIM2P49643 LINC01126-201ENST00000623515 1646 ntBASIC17.03■□□□□ 0.32
PRIM2P49643 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PRIM2P49643 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRIM2P49643 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRIM2P49643 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRIM2P49643 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PRIM2P49643 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PRIM2P49643 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 KRT18P55-202ENST00000578578 1546 ntBASIC17.02■□□□□ 0.32
PRIM2P49643 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRIM2P49643 AC139713.2-201ENST00000641328 2723 ntBASIC17.02■□□□□ 0.32
PRIM2P49643 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PRIM2P49643 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.02■□□□□ 0.32
PRIM2P49643 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.02■□□□□ 0.32
PRIM2P49643 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PRIM2P49643 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.02■□□□□ 0.32
PRIM2P49643 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.02■□□□□ 0.32
PRIM2P49643 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.02■□□□□ 0.32
PRIM2P49643 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.02■□□□□ 0.32
PRIM2P49643 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.02■□□□□ 0.32
PRIM2P49643 AL138966.2-201ENST00000621997 464 ntBASIC17.02■□□□□ 0.32
PRIM2P49643 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.02■□□□□ 0.32
PRIM2P49643 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRIM2P49643 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
PRIM2P49643 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRIM2P49643 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PRIM2P49643 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRIM2P49643 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.02■□□□□ 0.31
PRIM2P49643 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRIM2P49643 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRIM2P49643 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRIM2P49643 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms