Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.74■□□□□ 0.11
CX3CR1P49238 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CX3CR1P49238 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.74■□□□□ 0.11
CX3CR1P49238 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.74■□□□□ 0.11
CX3CR1P49238 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.74■□□□□ 0.11
CX3CR1P49238 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.74■□□□□ 0.11
CX3CR1P49238 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.74■□□□□ 0.11
CX3CR1P49238 AC140113.3-201ENST00000605663 199 ntBASIC15.74■□□□□ 0.11
CX3CR1P49238 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.74■□□□□ 0.11
CX3CR1P49238 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.74■□□□□ 0.11
CX3CR1P49238 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CX3CR1P49238 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CX3CR1P49238 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CX3CR1P49238 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.73■□□□□ 0.11
CX3CR1P49238 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 AC022898.2-201ENST00000616822 1312 ntBASIC15.73■□□□□ 0.11
CX3CR1P49238 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CX3CR1P49238 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 LINC00602-201ENST00000629776 2065 ntBASIC15.73■□□□□ 0.11
CX3CR1P49238 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.73■□□□□ 0.11
CX3CR1P49238 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.73■□□□□ 0.11
CX3CR1P49238 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.73■□□□□ 0.11
CX3CR1P49238 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.73■□□□□ 0.11
CX3CR1P49238 LINC00167-201ENST00000530583 1419 ntBASIC15.73■□□□□ 0.11
CX3CR1P49238 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.73■□□□□ 0.11
CX3CR1P49238 NFIC-211ENST00000641145 8399 ntBASIC15.73■□□□□ 0.11
CX3CR1P49238 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CX3CR1P49238 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CX3CR1P49238 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CX3CR1P49238 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CX3CR1P49238 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CX3CR1P49238 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.73■□□□□ 0.11
CX3CR1P49238 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CX3CR1P49238 AC100803.2-201ENST00000562459 1963 ntBASIC15.73■□□□□ 0.11
CX3CR1P49238 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CX3CR1P49238 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CX3CR1P49238 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CX3CR1P49238 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.72■□□□□ 0.11
CX3CR1P49238 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CX3CR1P49238 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CX3CR1P49238 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.72■□□□□ 0.11
CX3CR1P49238 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.72■□□□□ 0.11
CX3CR1P49238 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CX3CR1P49238 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms