Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.91■□□□□ 0.46
CSNK1DP48730 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1DP48730 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1DP48730 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CSNK1DP48730 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CSNK1DP48730 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.9■□□□□ 0.46
CSNK1DP48730 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CSNK1DP48730 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CSNK1DP48730 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.9■□□□□ 0.46
CSNK1DP48730 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CSNK1DP48730 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.9■□□□□ 0.46
CSNK1DP48730 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSNK1DP48730 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CSNK1DP48730 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.89■□□□□ 0.46
CSNK1DP48730 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CSNK1DP48730 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1DP48730 AC008764.6-201ENST00000595909 2069 ntBASIC17.89■□□□□ 0.45
CSNK1DP48730 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.89■□□□□ 0.45
CSNK1DP48730 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CSNK1DP48730 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.89■□□□□ 0.45
CSNK1DP48730 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.89■□□□□ 0.45
CSNK1DP48730 AC005104.2-201ENST00000427818 678 ntBASIC17.89■□□□□ 0.45
CSNK1DP48730 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1DP48730 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.89■□□□□ 0.45
CSNK1DP48730 UNC93B7-201ENST00000509439 705 ntBASIC17.89■□□□□ 0.45
CSNK1DP48730 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1DP48730 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.89■□□□□ 0.45
CSNK1DP48730 IFNL4P1-201ENST00000607083 540 ntBASIC17.89■□□□□ 0.45
CSNK1DP48730 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CSNK1DP48730 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
CSNK1DP48730 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1DP48730 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.89■□□□□ 0.45
CSNK1DP48730 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.89■□□□□ 0.45
CSNK1DP48730 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CSNK1DP48730 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSNK1DP48730 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1DP48730 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1DP48730 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1DP48730 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1DP48730 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1DP48730 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1DP48730 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1DP48730 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1DP48730 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1DP48730 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1DP48730 ABCD1P5-201ENST00000445663 754 ntBASIC17.88■□□□□ 0.45
CSNK1DP48730 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1DP48730 AC132008.2-207ENST00000454517 770 ntBASIC17.88■□□□□ 0.45
CSNK1DP48730 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.88■□□□□ 0.45
CSNK1DP48730 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.88■□□□□ 0.45
CSNK1DP48730 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1DP48730 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CSNK1DP48730 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1DP48730 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1DP48730 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1DP48730 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.88■□□□□ 0.45
CSNK1DP48730 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1DP48730 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSNK1DP48730 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.88■□□□□ 0.45
CSNK1DP48730 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms