Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.61■□□□□ 0.57
MMP13P45452 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.61■□□□□ 0.57
MMP13P45452 AL391807.1-203ENST00000604392 2365 ntBASIC18.61■□□□□ 0.57
MMP13P45452 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP13P45452 AL096828.2-201ENST00000567259 1965 ntBASIC18.61■□□□□ 0.57
MMP13P45452 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MMP13P45452 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP13P45452 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP13P45452 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
MMP13P45452 LINC01126-201ENST00000623515 1646 ntBASIC18.6■□□□□ 0.57
MMP13P45452 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.6■□□□□ 0.57
MMP13P45452 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MMP13P45452 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP13P45452 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MMP13P45452 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP13P45452 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 AC092597.1-201ENST00000487352 616 ntBASIC18.6■□□□□ 0.57
MMP13P45452 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.6■□□□□ 0.57
MMP13P45452 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.6■□□□□ 0.57
MMP13P45452 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.6■□□□□ 0.57
MMP13P45452 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MMP13P45452 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MMP13P45452 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
MMP13P45452 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MMP13P45452 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MMP13P45452 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.6■□□□□ 0.57
MMP13P45452 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP13P45452 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 NKILA-202ENST00000614771 2598 ntBASIC18.59■□□□□ 0.57
MMP13P45452 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
MMP13P45452 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP13P45452 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.59■□□□□ 0.57
MMP13P45452 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.59■□□□□ 0.57
MMP13P45452 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.59■□□□□ 0.57
MMP13P45452 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP13P45452 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 PHGDH-209ENST00000641074 1780 ntBASIC18.59■□□□□ 0.57
MMP13P45452 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP13P45452 AP001094.4-201ENST00000579008 2176 ntBASIC18.59■□□□□ 0.57
MMP13P45452 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.59■□□□□ 0.57
MMP13P45452 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MMP13P45452 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.58■□□□□ 0.57
MMP13P45452 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP13P45452 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
MMP13P45452 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
MMP13P45452 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP13P45452 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP13P45452 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP13P45452 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MMP13P45452 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.58■□□□□ 0.57
MMP13P45452 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP13P45452 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.58■□□□□ 0.57
MMP13P45452 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
MMP13P45452 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP13P45452 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MMP13P45452 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MMP13P45452 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP13P45452 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP13P45452 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
MMP13P45452 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
MMP13P45452 HLA-F-220ENST00000434407 884 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms