Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC1A2P43004 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A2P43004 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC1A2P43004 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.83■□□□□ 0.44
SLC1A2P43004 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 LINC00304-203ENST00000565008 1864 ntBASIC17.83■□□□□ 0.44
SLC1A2P43004 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A2P43004 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC1A2P43004 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A2P43004 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A2P43004 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A2P43004 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A2P43004 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A2P43004 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A2P43004 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A2P43004 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 HBZP1-201ENST00000354915 429 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 IGHGP-201ENST00000390555 1178 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 AK4P3-201ENST00000418260 669 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 TSPY12P-201ENST00000421279 868 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC1A2P43004 AC112907.2-201ENST00000448639 330 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 HOMER2P1-201ENST00000455653 964 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 VENTXP5-201ENST00000523979 775 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 ZNF444P1-201ENST00000559497 298 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A2P43004 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC1A2P43004 AC116407.2-201ENST00000613639 860 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 AC009154.2-201ENST00000621177 724 ntBASIC17.82■□□□□ 0.44
SLC1A2P43004 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SLC1A2P43004 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A2P43004 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A2P43004 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A2P43004 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A2P43004 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A2P43004 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 MIR662-201ENST00000384847 95 ntBASIC17.81■□□□□ 0.44
SLC1A2P43004 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC1A2P43004 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC1A2P43004 AP003733.1-201ENST00000491725 852 ntBASIC17.81■□□□□ 0.44
SLC1A2P43004 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC1A2P43004 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC1A2P43004 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC1A2P43004 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC1A2P43004 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.81■□□□□ 0.44
SLC1A2P43004 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC1A2P43004 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC1A2P43004 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC1A2P43004 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC1A2P43004 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms