Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.2■□□□□ 0.82
PRPHP41219 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PRPHP41219 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPHP41219 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PRPHP41219 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPHP41219 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRPHP41219 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PRPHP41219 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.19■□□□□ 0.82
PRPHP41219 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.19■□□□□ 0.82
PRPHP41219 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.19■□□□□ 0.82
PRPHP41219 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.19■□□□□ 0.82
PRPHP41219 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.19■□□□□ 0.82
PRPHP41219 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.19■□□□□ 0.82
PRPHP41219 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.19■□□□□ 0.82
PRPHP41219 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.19■□□□□ 0.82
PRPHP41219 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.19■□□□□ 0.82
PRPHP41219 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.19■□□□□ 0.82
PRPHP41219 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRPHP41219 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PRPHP41219 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPHP41219 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPHP41219 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPHP41219 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPHP41219 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 AC096633.1-201ENST00000422446 749 ntBASIC20.18■□□□□ 0.82
PRPHP41219 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPHP41219 AL592071.1-201ENST00000611956 408 ntBASIC20.18■□□□□ 0.82
PRPHP41219 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPHP41219 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPHP41219 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.18■□□□□ 0.82
PRPHP41219 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
PRPHP41219 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.18■□□□□ 0.82
PRPHP41219 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.18■□□□□ 0.82
PRPHP41219 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.18■□□□□ 0.82
PRPHP41219 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRPHP41219 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.17■□□□□ 0.82
PRPHP41219 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRPHP41219 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PRPHP41219 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PRPHP41219 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PRPHP41219 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PRPHP41219 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.17■□□□□ 0.82
PRPHP41219 PCED1CP-201ENST00000419887 785 ntBASIC20.17■□□□□ 0.82
PRPHP41219 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.17■□□□□ 0.82
PRPHP41219 AL121672.3-201ENST00000608644 468 ntBASIC20.17■□□□□ 0.82
PRPHP41219 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
PRPHP41219 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRPHP41219 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.17■□□□□ 0.82
PRPHP41219 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.17■□□□□ 0.82
PRPHP41219 AC097374.2-201ENST00000618617 1306 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms