Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
USP8P40818 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.51■□□□□ 0.71
USP8P40818 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP8P40818 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.51■□□□□ 0.71
USP8P40818 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 FLJ13224-201ENST00000313737 1514 ntBASIC19.51■□□□□ 0.71
USP8P40818 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP8P40818 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
USP8P40818 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.5■□□□□ 0.71
USP8P40818 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
USP8P40818 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.5■□□□□ 0.71
USP8P40818 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
USP8P40818 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
USP8P40818 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.5■□□□□ 0.71
USP8P40818 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.5■□□□□ 0.71
USP8P40818 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.5■□□□□ 0.71
USP8P40818 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.5■□□□□ 0.71
USP8P40818 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.5■□□□□ 0.71
USP8P40818 AC011558.1-201ENST00000623459 338 ntBASIC19.5■□□□□ 0.71
USP8P40818 AL031432.5-201ENST00000641059 760 ntBASIC19.5■□□□□ 0.71
USP8P40818 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP8P40818 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
USP8P40818 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
USP8P40818 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.49■□□□□ 0.71
USP8P40818 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
USP8P40818 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
USP8P40818 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
USP8P40818 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.49■□□□□ 0.71
USP8P40818 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
USP8P40818 BX664615.1-201ENST00000443558 458 ntBASIC19.49■□□□□ 0.71
USP8P40818 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.49■□□□□ 0.71
USP8P40818 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.49■□□□□ 0.71
USP8P40818 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.49■□□□□ 0.71
USP8P40818 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP8P40818 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.49■□□□□ 0.71
USP8P40818 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.48■□□□□ 0.71
USP8P40818 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
USP8P40818 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
USP8P40818 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 AC093010.1-201ENST00000473625 1624 ntBASIC19.48■□□□□ 0.71
USP8P40818 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
USP8P40818 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 PVRIG2P-201ENST00000435460 978 ntBASIC19.48■□□□□ 0.71
USP8P40818 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.48■□□□□ 0.71
USP8P40818 RASA4DP-201ENST00000460726 1199 ntBASIC19.48■□□□□ 0.71
USP8P40818 YBX1P2-201ENST00000489612 999 ntBASIC19.48■□□□□ 0.71
USP8P40818 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.48■□□□□ 0.71
USP8P40818 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
USP8P40818 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.48■□□□□ 0.71
USP8P40818 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.48■□□□□ 0.71
USP8P40818 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.48■□□□□ 0.71
USP8P40818 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
USP8P40818 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.48■□□□□ 0.71
USP8P40818 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
USP8P40818 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP8P40818 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.48■□□□□ 0.71
USP8P40818 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
USP8P40818 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
USP8P40818 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms