Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KRT2P35908 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT2P35908 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 MIR1224-201ENST00000408193 85 ntBASIC20.5■□□□□ 0.87
KRT2P35908 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 BX276092.5-203ENST00000456199 560 ntBASIC20.5■□□□□ 0.87
KRT2P35908 RN7SL606P-201ENST00000472779 293 ntBASIC20.5■□□□□ 0.87
KRT2P35908 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
KRT2P35908 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT2P35908 AC090616.6-201ENST00000582640 721 ntBASIC20.5■□□□□ 0.87
KRT2P35908 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.5■□□□□ 0.87
KRT2P35908 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT2P35908 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 AC124864.1-201ENST00000623408 392 ntBASIC20.5■□□□□ 0.87
KRT2P35908 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT2P35908 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.5■□□□□ 0.87
KRT2P35908 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT2P35908 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.5■□□□□ 0.87
KRT2P35908 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KRT2P35908 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
KRT2P35908 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT2P35908 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KRT2P35908 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KRT2P35908 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT2P35908 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT2P35908 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
KRT2P35908 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.49■□□□□ 0.87
KRT2P35908 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.49■□□□□ 0.87
KRT2P35908 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 AL121672.3-201ENST00000608644 468 ntBASIC20.49■□□□□ 0.87
KRT2P35908 IGHV3-41-201ENST00000613121 348 ntBASIC20.49■□□□□ 0.87
KRT2P35908 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT2P35908 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
KRT2P35908 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
KRT2P35908 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT2P35908 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
KRT2P35908 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT2P35908 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
KRT2P35908 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
KRT2P35908 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT2P35908 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 DDX43P3-201ENST00000441064 443 ntBASIC20.48■□□□□ 0.87
KRT2P35908 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
KRT2P35908 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.48■□□□□ 0.87
KRT2P35908 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT2P35908 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
KRT2P35908 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
KRT2P35908 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT2P35908 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
KRT2P35908 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
KRT2P35908 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT2P35908 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.47■□□□□ 0.87
KRT2P35908 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
KRT2P35908 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT2P35908 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT2P35908 ARMC10P1-201ENST00000313754 855 ntBASIC20.47■□□□□ 0.87
KRT2P35908 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.47■□□□□ 0.87
KRT2P35908 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT2P35908 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms