Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNNA1P35221 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTNNA1P35221 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTNNA1P35221 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.91■□□□□ 0.62
CTNNA1P35221 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTNNA1P35221 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTNNA1P35221 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.91■□□□□ 0.62
CTNNA1P35221 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.91■□□□□ 0.62
CTNNA1P35221 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CTNNA1P35221 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CTNNA1P35221 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 MIR3917-201ENST00000580971 93 ntBASIC18.9■□□□□ 0.62
CTNNA1P35221 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 FAM87A-204ENST00000613235 858 ntBASIC18.9■□□□□ 0.62
CTNNA1P35221 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 LINC00167-201ENST00000530583 1419 ntBASIC18.9■□□□□ 0.62
CTNNA1P35221 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CTNNA1P35221 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTNNA1P35221 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CTNNA1P35221 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTNNA1P35221 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTNNA1P35221 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTNNA1P35221 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CTNNA1P35221 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTNNA1P35221 AL355312.1-201ENST00000407115 2176 ntBASIC18.89■□□□□ 0.62
CTNNA1P35221 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTNNA1P35221 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.62
CTNNA1P35221 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.89■□□□□ 0.61
CTNNA1P35221 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.89■□□□□ 0.61
CTNNA1P35221 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 TSPY15P-201ENST00000457163 923 ntBASIC18.89■□□□□ 0.61
CTNNA1P35221 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 NEK4P2-201ENST00000580004 1012 ntBASIC18.89■□□□□ 0.61
CTNNA1P35221 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.89■□□□□ 0.61
CTNNA1P35221 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.89■□□□□ 0.61
CTNNA1P35221 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.89■□□□□ 0.61
CTNNA1P35221 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CTNNA1P35221 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.89■□□□□ 0.61
CTNNA1P35221 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CTNNA1P35221 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.89■□□□□ 0.61
CTNNA1P35221 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CTNNA1P35221 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CTNNA1P35221 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTNNA1P35221 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
CTNNA1P35221 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CTNNA1P35221 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNNA1P35221 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNNA1P35221 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNNA1P35221 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTNNA1P35221 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTNNA1P35221 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CTNNA1P35221 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTNNA1P35221 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CTNNA1P35221 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CTNNA1P35221 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
CTNNA1P35221 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNNA1P35221 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTNNA1P35221 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.88■□□□□ 0.61
CTNNA1P35221 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms