Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.39■□□□□ 0.05
CD40P25942 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 ABCD1P5-201ENST00000445663 754 ntBASIC15.39■□□□□ 0.05
CD40P25942 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.39■□□□□ 0.05
CD40P25942 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
CD40P25942 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CD40P25942 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.39■□□□□ 0.05
CD40P25942 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.39■□□□□ 0.05
CD40P25942 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.39■□□□□ 0.05
CD40P25942 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 MTDHP3-201ENST00000594186 672 ntBASIC15.39■□□□□ 0.05
CD40P25942 AP001269.4-201ENST00000609611 512 ntBASIC15.39■□□□□ 0.05
CD40P25942 TP73-AS1-207ENST00000624167 988 ntBASIC15.39■□□□□ 0.05
CD40P25942 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.39■□□□□ 0.05
CD40P25942 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CD40P25942 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.39■□□□□ 0.05
CD40P25942 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.39■□□□□ 0.05
CD40P25942 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CD40P25942 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.39■□□□□ 0.05
CD40P25942 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD40P25942 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.38■□□□□ 0.05
CD40P25942 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.38■□□□□ 0.05
CD40P25942 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 AP005117.1-201ENST00000584346 1413 ntBASIC15.38■□□□□ 0.05
CD40P25942 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CD40P25942 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.38■□□□□ 0.05
CD40P25942 MRPL3P1-201ENST00000400109 1033 ntBASIC15.38■□□□□ 0.05
CD40P25942 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.38■□□□□ 0.05
CD40P25942 FAM197Y8-203ENST00000450145 560 ntBASIC15.38■□□□□ 0.05
CD40P25942 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.38■□□□□ 0.05
CD40P25942 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CD40P25942 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.38■□□□□ 0.05
CD40P25942 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.38■□□□□ 0.05
CD40P25942 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.38■□□□□ 0.05
CD40P25942 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 REXO1L9P-201ENST00000604264 2108 ntBASIC15.38■□□□□ 0.05
CD40P25942 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CD40P25942 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.38■□□□□ 0.05
CD40P25942 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CD40P25942 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.37■□□□□ 0.05
CD40P25942 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.37■□□□□ 0.05
CD40P25942 AC010460.3-201ENST00000511359 1579 ntBASIC15.37■□□□□ 0.05
CD40P25942 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CD40P25942 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.37■□□□□ 0.05
CD40P25942 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.37■□□□□ 0.05
CD40P25942 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CD40P25942 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CD40P25942 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.37■□□□□ 0.05
CD40P25942 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.37■□□□□ 0.05
CD40P25942 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.37■□□□□ 0.05
CD40P25942 FGFR3P6-201ENST00000457012 610 ntBASIC15.37■□□□□ 0.05
CD40P25942 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.37■□□□□ 0.05
CD40P25942 SCARNA2-201ENST00000458748 420 ntBASIC15.37■□□□□ 0.05
CD40P25942 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CD40P25942 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
CD40P25942 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.37■□□□□ 0.05
CD40P25942 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms