Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.74■□□□□ 0.27
CHMP24386 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 AC080080.1-201ENST00000625121 2420 ntBASIC16.74■□□□□ 0.27
CHMP24386 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP24386 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 AC112907.2-201ENST00000448639 330 ntBASIC16.74■□□□□ 0.27
CHMP24386 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.74■□□□□ 0.27
CHMP24386 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 AC009065.1-201ENST00000564055 1225 ntBASIC16.74■□□□□ 0.27
CHMP24386 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.74■□□□□ 0.27
CHMP24386 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP24386 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP24386 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 PP12613-201ENST00000424958 2230 ntBASIC16.74■□□□□ 0.27
CHMP24386 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CHMP24386 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CHMP24386 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.74■□□□□ 0.27
CHMP24386 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP24386 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP24386 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP24386 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP24386 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP24386 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP24386 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP24386 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP24386 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CHMP24386 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.73■□□□□ 0.27
CHMP24386 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP24386 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 SPDYE15P-201ENST00000424157 909 ntBASIC16.73■□□□□ 0.27
CHMP24386 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP24386 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.73■□□□□ 0.27
CHMP24386 AC010240.3-201ENST00000607688 395 ntBASIC16.73■□□□□ 0.27
CHMP24386 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.73■□□□□ 0.27
CHMP24386 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CHMP24386 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.73■□□□□ 0.27
CHMP24386 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 AC141586.5-201ENST00000624546 2050 ntBASIC16.73■□□□□ 0.27
CHMP24386 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHMP24386 AC006116.8-202ENST00000587620 1550 ntBASIC16.72■□□□□ 0.27
CHMP24386 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CHMP24386 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHMP24386 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP24386 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP24386 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP24386 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 TNRC18P3-201ENST00000441896 2691 ntBASIC16.72■□□□□ 0.27
CHMP24386 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CHMP24386 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP24386 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP24386 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHMP24386 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms