Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
XPAP23025 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.02■□□□□ 0.48
XPAP23025 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.02■□□□□ 0.48
XPAP23025 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
XPAP23025 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
XPAP23025 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.02■□□□□ 0.48
XPAP23025 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.02■□□□□ 0.48
XPAP23025 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.02■□□□□ 0.48
XPAP23025 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.02■□□□□ 0.48
XPAP23025 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.02■□□□□ 0.48
XPAP23025 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.02■□□□□ 0.48
XPAP23025 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.02■□□□□ 0.48
XPAP23025 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.02■□□□□ 0.48
XPAP23025 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.02■□□□□ 0.48
XPAP23025 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 AL353801.3-201ENST00000609898 542 ntBASIC18.02■□□□□ 0.48
XPAP23025 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XPAP23025 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
XPAP23025 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.02■□□□□ 0.47
XPAP23025 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
XPAP23025 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
XPAP23025 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.02■□□□□ 0.47
XPAP23025 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
XPAP23025 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
XPAP23025 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
XPAP23025 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.01■□□□□ 0.47
XPAP23025 POM121L3P-201ENST00000419331 1163 ntBASIC18.01■□□□□ 0.47
XPAP23025 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.01■□□□□ 0.47
XPAP23025 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.01■□□□□ 0.47
XPAP23025 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
XPAP23025 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.01■□□□□ 0.47
XPAP23025 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.01■□□□□ 0.47
XPAP23025 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 REXO1L9P-201ENST00000604264 2108 ntBASIC18.01■□□□□ 0.47
XPAP23025 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.01■□□□□ 0.47
XPAP23025 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
XPAP23025 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
XPAP23025 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
XPAP23025 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18■□□□□ 0.47
XPAP23025 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
XPAP23025 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18■□□□□ 0.47
XPAP23025 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18■□□□□ 0.47
XPAP23025 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
XPAP23025 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18■□□□□ 0.47
XPAP23025 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18■□□□□ 0.47
XPAP23025 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18■□□□□ 0.47
XPAP23025 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18■□□□□ 0.47
XPAP23025 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18■□□□□ 0.47
XPAP23025 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18■□□□□ 0.47
XPAP23025 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18■□□□□ 0.47
XPAP23025 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
XPAP23025 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18■□□□□ 0.47
XPAP23025 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18■□□□□ 0.47
XPAP23025 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms