Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.63■□□□□ 0.25
TNFRSF1BP20333 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TNFRSF1BP20333 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 LINC00167-201ENST00000530583 1419 ntBASIC16.62■□□□□ 0.25
TNFRSF1BP20333 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 TSPY14P-201ENST00000303979 915 ntBASIC16.62■□□□□ 0.25
TNFRSF1BP20333 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 AC010653.2-201ENST00000623505 997 ntBASIC16.62■□□□□ 0.25
TNFRSF1BP20333 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNFRSF1BP20333 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 AC011676.5-201ENST00000624864 2660 ntBASIC16.61■□□□□ 0.25
TNFRSF1BP20333 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.61■□□□□ 0.25
TNFRSF1BP20333 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 MIR718-201ENST00000390190 70 ntBASIC16.61■□□□□ 0.25
TNFRSF1BP20333 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNFRSF1BP20333 NKILA-202ENST00000614771 2598 ntBASIC16.61■□□□□ 0.25
TNFRSF1BP20333 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms