Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CFTRP13569 LINC00982-205ENST00000420957 435 ntBASIC30.38■■■□□ 2.45
CFTRP13569 AC015922.1-201ENST00000421102 1152 ntBASIC30.38■■■□□ 2.45
CFTRP13569 DDX43P3-201ENST00000441064 443 ntBASIC30.38■■■□□ 2.45
CFTRP13569 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC30.38■■■□□ 2.45
CFTRP13569 AC069262.1-201ENST00000539058 672 ntBASIC30.38■■■□□ 2.45
CFTRP13569 AC087641.1-201ENST00000557561 1021 ntBASIC30.38■■■□□ 2.45
CFTRP13569 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC30.38■■■□□ 2.45
CFTRP13569 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CFTRP13569 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CFTRP13569 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC30.37■■■□□ 2.45
CFTRP13569 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CFTRP13569 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
CFTRP13569 CLDN5-201ENST00000403084 2357 ntBASIC30.37■■■□□ 2.45
CFTRP13569 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CFTRP13569 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CFTRP13569 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC30.37■■■□□ 2.45
CFTRP13569 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC30.37■■■□□ 2.45
CFTRP13569 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC30.37■■■□□ 2.45
CFTRP13569 TMED1-207ENST00000591695 809 ntTSL 5 BASIC30.37■■■□□ 2.45
CFTRP13569 YTHDF3-AS1-201ENST00000603538 718 ntBASIC30.37■■■□□ 2.45
CFTRP13569 AC012645.4-201ENST00000610691 1061 ntBASIC30.37■■■□□ 2.45
CFTRP13569 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC30.37■■■□□ 2.45
CFTRP13569 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC30.37■■■□□ 2.45
CFTRP13569 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC30.36■■■□□ 2.45
CFTRP13569 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CFTRP13569 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC30.36■■■□□ 2.45
CFTRP13569 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC30.36■■■□□ 2.45
CFTRP13569 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFTRP13569 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFTRP13569 AC067863.1-201ENST00000494933 530 ntBASIC30.36■■■□□ 2.45
CFTRP13569 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC30.36■■■□□ 2.45
CFTRP13569 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CFTRP13569 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC30.36■■■□□ 2.45
CFTRP13569 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC30.36■■■□□ 2.45
CFTRP13569 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
CFTRP13569 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 AL355306.1-201ENST00000415580 579 ntBASIC30.35■■■□□ 2.45
CFTRP13569 AC109462.3-201ENST00000573934 613 ntBASIC30.35■■■□□ 2.45
CFTRP13569 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC30.35■■■□□ 2.45
CFTRP13569 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC30.35■■■□□ 2.45
CFTRP13569 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC30.35■■■□□ 2.45
CFTRP13569 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CFTRP13569 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC30.34■■■□□ 2.45
CFTRP13569 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC30.34■■■□□ 2.45
CFTRP13569 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CFTRP13569 METTL26-204ENST00000397665 558 ntTSL 2 BASIC30.34■■■□□ 2.45
CFTRP13569 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC30.34■■■□□ 2.45
CFTRP13569 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC30.34■■■□□ 2.45
CFTRP13569 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
CFTRP13569 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFTRP13569 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
CFTRP13569 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC30.34■■■□□ 2.45
CFTRP13569 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC30.34■■■□□ 2.45
CFTRP13569 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
CFTRP13569 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CFTRP13569 PCDHAC2-203ENST00000615316 3011 ntBASIC30.34■■■□□ 2.45
CFTRP13569 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CFTRP13569 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC30.33■■■□□ 2.45
CFTRP13569 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC30.33■■■□□ 2.45
CFTRP13569 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC30.33■■■□□ 2.45
CFTRP13569 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC30.33■■■□□ 2.45
CFTRP13569 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CFTRP13569 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC30.33■■■□□ 2.45
CFTRP13569 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CFTRP13569 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CFTRP13569 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CFTRP13569 AC097637.2-201ENST00000624096 1997 ntBASIC30.33■■■□□ 2.45
CFTRP13569 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CFTRP13569 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC30.33■■■□□ 2.45
CFTRP13569 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
CFTRP13569 BAD-202ENST00000394531 631 ntTSL 3 BASIC30.32■■■□□ 2.44
CFTRP13569 FALEC-201ENST00000416894 566 ntTSL 3 BASIC30.32■■■□□ 2.44
CFTRP13569 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC30.32■■■□□ 2.44
CFTRP13569 STK19B-204ENST00000512515 211 ntBASIC30.32■■■□□ 2.44
CFTRP13569 DUX4L27-201ENST00000554796 1261 ntBASIC30.32■■■□□ 2.44
CFTRP13569 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CFTRP13569 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFTRP13569 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CFTRP13569 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC30.32■■■□□ 2.44
CFTRP13569 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CFTRP13569 AC005332.7-201ENST00000614046 2005 ntBASIC30.32■■■□□ 2.44
CFTRP13569 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CFTRP13569 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFTRP13569 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
CFTRP13569 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CFTRP13569 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC30.32■■■□□ 2.44
CFTRP13569 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CFTRP13569 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms