Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXD8P13378 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXD8P13378 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.62■□□□□ 0.73
HOXD8P13378 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXD8P13378 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HOXD8P13378 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXD8P13378 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXD8P13378 AC007967.2-201ENST00000432613 625 ntBASIC19.61■□□□□ 0.73
HOXD8P13378 SIGLEC30P-201ENST00000455569 941 ntBASIC19.61■□□□□ 0.73
HOXD8P13378 AC092183.1-201ENST00000469884 875 ntBASIC19.61■□□□□ 0.73
HOXD8P13378 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXD8P13378 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
HOXD8P13378 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HOXD8P13378 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXD8P13378 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXD8P13378 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD8P13378 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXD8P13378 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD8P13378 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.6■□□□□ 0.73
HOXD8P13378 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXD8P13378 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD8P13378 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXD8P13378 AC093503.3-201ENST00000624917 2352 ntBASIC19.6■□□□□ 0.73
HOXD8P13378 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXD8P13378 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HOXD8P13378 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.6■□□□□ 0.73
HOXD8P13378 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.6■□□□□ 0.73
HOXD8P13378 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXD8P13378 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD8P13378 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.6■□□□□ 0.73
HOXD8P13378 AC109462.3-201ENST00000573934 613 ntBASIC19.6■□□□□ 0.73
HOXD8P13378 AC064836.3-201ENST00000607928 673 ntBASIC19.6■□□□□ 0.73
HOXD8P13378 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.6■□□□□ 0.73
HOXD8P13378 AC055717.3-201ENST00000622967 595 ntBASIC19.6■□□□□ 0.73
HOXD8P13378 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD8P13378 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.6■□□□□ 0.73
HOXD8P13378 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.6■□□□□ 0.73
HOXD8P13378 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD8P13378 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD8P13378 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.6■□□□□ 0.73
HOXD8P13378 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HOXD8P13378 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HOXD8P13378 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HOXD8P13378 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HOXD8P13378 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXD8P13378 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXD8P13378 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXD8P13378 AC002558.1-201ENST00000488906 803 ntBASIC19.59■□□□□ 0.73
HOXD8P13378 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXD8P13378 IGHV3-65-201ENST00000523210 341 ntBASIC19.59■□□□□ 0.73
HOXD8P13378 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXD8P13378 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXD8P13378 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.59■□□□□ 0.73
HOXD8P13378 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.59■□□□□ 0.73
HOXD8P13378 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXD8P13378 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
HOXD8P13378 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.59■□□□□ 0.73
HOXD8P13378 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.59■□□□□ 0.73
HOXD8P13378 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
HOXD8P13378 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
HOXD8P13378 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HOXD8P13378 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HOXD8P13378 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.58■□□□□ 0.73
HOXD8P13378 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
HOXD8P13378 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.58■□□□□ 0.73
HOXD8P13378 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
HOXD8P13378 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.58■□□□□ 0.73
HOXD8P13378 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.58■□□□□ 0.73
HOXD8P13378 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.58■□□□□ 0.73
HOXD8P13378 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HOXD8P13378 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
HOXD8P13378 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.58■□□□□ 0.72
HOXD8P13378 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.58■□□□□ 0.72
HOXD8P13378 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.58■□□□□ 0.72
HOXD8P13378 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.58■□□□□ 0.72
HOXD8P13378 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXD8P13378 AC008667.4-201ENST00000607370 168 ntBASIC19.58■□□□□ 0.72
HOXD8P13378 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXD8P13378 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms