Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SRFP11831 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18■□□□□ 0.47
SRFP11831 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18■□□□□ 0.47
SRFP11831 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.99■□□□□ 0.47
SRFP11831 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 AC093010.1-201ENST00000473625 1624 ntBASIC17.99■□□□□ 0.47
SRFP11831 ANO7L1-203ENST00000602586 1720 ntBASIC17.99■□□□□ 0.47
SRFP11831 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.99■□□□□ 0.47
SRFP11831 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.99■□□□□ 0.47
SRFP11831 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.99■□□□□ 0.47
SRFP11831 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.99■□□□□ 0.47
SRFP11831 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SRFP11831 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SRFP11831 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFP11831 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SRFP11831 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SRFP11831 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFP11831 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SRFP11831 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.98■□□□□ 0.47
SRFP11831 PTCHD3P3-201ENST00000403073 906 ntBASIC17.98■□□□□ 0.47
SRFP11831 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.98■□□□□ 0.47
SRFP11831 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.98■□□□□ 0.47
SRFP11831 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
SRFP11831 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFP11831 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.98■□□□□ 0.47
SRFP11831 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.98■□□□□ 0.47
SRFP11831 OR7E47P-204ENST00000575924 449 ntBASIC17.98■□□□□ 0.47
SRFP11831 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.98■□□□□ 0.47
SRFP11831 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFP11831 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SRFP11831 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
SRFP11831 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
SRFP11831 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.98■□□□□ 0.47
SRFP11831 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SRFP11831 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.97■□□□□ 0.47
SRFP11831 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
SRFP11831 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 AC092474.2-201ENST00000424288 719 ntBASIC17.97■□□□□ 0.47
SRFP11831 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.97■□□□□ 0.47
SRFP11831 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.97■□□□□ 0.47
SRFP11831 AC025678.2-201ENST00000562061 970 ntBASIC17.97■□□□□ 0.47
SRFP11831 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 AC018445.3-201ENST00000624177 1945 ntBASIC17.97■□□□□ 0.47
SRFP11831 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SRFP11831 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.97■□□□□ 0.47
SRFP11831 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 CLDN5-201ENST00000403084 2357 ntBASIC17.96■□□□□ 0.47
SRFP11831 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SRFP11831 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SRFP11831 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 AC004461.1-201ENST00000412461 403 ntBASIC17.96■□□□□ 0.47
SRFP11831 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SRFP11831 HLA-J-203ENST00000494367 1087 ntBASIC17.96■□□□□ 0.47
SRFP11831 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.96■□□□□ 0.47
SRFP11831 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.96■□□□□ 0.47
SRFP11831 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.96■□□□□ 0.47
SRFP11831 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.96■□□□□ 0.47
SRFP11831 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.96■□□□□ 0.47
SRFP11831 AC105339.1-204ENST00000636249 355 ntBASIC17.96■□□□□ 0.47
SRFP11831 AC092902.6-201ENST00000641783 218 ntBASIC17.96■□□□□ 0.47
SRFP11831 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.96■□□□□ 0.47
SRFP11831 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms