Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TPM1P09493 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.72■□□□□ 0.75
TPM1P09493 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM1P09493 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TPM1P09493 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TPM1P09493 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM1P09493 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.72■□□□□ 0.75
TPM1P09493 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.72■□□□□ 0.75
TPM1P09493 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM1P09493 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.72■□□□□ 0.75
TPM1P09493 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TPM1P09493 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM1P09493 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.72■□□□□ 0.75
TPM1P09493 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 NKILA-202ENST00000614771 2598 ntBASIC19.72■□□□□ 0.75
TPM1P09493 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.72■□□□□ 0.75
TPM1P09493 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPM1P09493 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.72■□□□□ 0.75
TPM1P09493 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 AL118508.1-201ENST00000613502 2345 ntBASIC19.71■□□□□ 0.75
TPM1P09493 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.71■□□□□ 0.75
TPM1P09493 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TPM1P09493 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 AC116562.2-201ENST00000507042 360 ntBASIC19.71■□□□□ 0.75
TPM1P09493 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.71■□□□□ 0.75
TPM1P09493 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.71■□□□□ 0.75
TPM1P09493 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.71■□□□□ 0.75
TPM1P09493 AL355312.1-201ENST00000407115 2176 ntBASIC19.71■□□□□ 0.75
TPM1P09493 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
TPM1P09493 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPM1P09493 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TPM1P09493 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TPM1P09493 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TPM1P09493 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TPM1P09493 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TPM1P09493 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 CRYGFP-201ENST00000418459 633 ntBASIC19.7■□□□□ 0.74
TPM1P09493 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.7■□□□□ 0.74
TPM1P09493 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.7■□□□□ 0.74
TPM1P09493 NUDT16P1-203ENST00000513809 620 ntBASIC19.7■□□□□ 0.74
TPM1P09493 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.7■□□□□ 0.74
TPM1P09493 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.7■□□□□ 0.74
TPM1P09493 MIR4674-201ENST00000582457 87 ntBASIC19.7■□□□□ 0.74
TPM1P09493 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.7■□□□□ 0.74
TPM1P09493 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.7■□□□□ 0.74
TPM1P09493 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.7■□□□□ 0.74
TPM1P09493 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.7■□□□□ 0.74
TPM1P09493 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.7■□□□□ 0.74
TPM1P09493 AL138688.1-201ENST00000624851 1594 ntBASIC19.7■□□□□ 0.74
TPM1P09493 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.7■□□□□ 0.74
TPM1P09493 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPM1P09493 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM1P09493 AL121761.2-201ENST00000598007 1648 ntBASIC19.69■□□□□ 0.74
TPM1P09493 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM1P09493 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.69■□□□□ 0.74
TPM1P09493 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms