Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSDP07339 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CTSDP07339 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.86□□□□□ -0.03
CTSDP07339 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.86□□□□□ -0.03
CTSDP07339 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CTSDP07339 MIR4674-201ENST00000582457 87 ntBASIC14.86□□□□□ -0.03
CTSDP07339 AF186192.3-201ENST00000583427 947 ntBASIC14.86□□□□□ -0.03
CTSDP07339 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CTSDP07339 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CTSDP07339 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSDP07339 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSDP07339 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CTSDP07339 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSDP07339 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CTSDP07339 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
CTSDP07339 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSDP07339 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.85□□□□□ -0.03
CTSDP07339 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSDP07339 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSDP07339 DGCR10-201ENST00000609839 495 ntBASIC14.85□□□□□ -0.03
CTSDP07339 AC116407.2-201ENST00000613639 860 ntBASIC14.85□□□□□ -0.03
CTSDP07339 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSDP07339 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
CTSDP07339 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CTSDP07339 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CTSDP07339 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CTSDP07339 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSDP07339 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.84□□□□□ -0.03
CTSDP07339 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CTSDP07339 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.84□□□□□ -0.03
CTSDP07339 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.84□□□□□ -0.03
CTSDP07339 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSDP07339 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CTSDP07339 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms